noteId	4a30b7f036ec11ea9bbcdd4c69495344
tags

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meth2expr

Objective

Gene expression prediction system from DNAm and DNA sequence data.

Input: (PromoterSeq, PromoterDNAm)

Output: (GeneExpression)

Plan

RNN on sequence data for prediction.

Scripts

• 01_collect_genomics.py -- used to download and basic processing of genomics info (genome sequence, genome annotation, chip platform metadata)