walkerlab · eywalker · Sep 1, 2025 · Jun 19, 2025 · Jun 19, 2025 · Jun 24, 2025
diff --git a/.devcontainer/Dockerfile b/.devcontainer/Dockerfile
@@ -26,7 +26,7 @@ RUN \
 USER vscode
 ENV PATH=/home/vscode/.local/bin:$PATH
 WORKDIR /home/vscode
-COPY --chown=vscode:nogroup src/orcabridge/requirements.txt /tmp/requirements.txt
+COPY --chown=vscode:nogroup src/orcapod/requirements.txt /tmp/requirements.txt
 RUN \
     # python setup
     curl -LsSf https://astral.sh/uv/install.sh | sh && \

diff --git a/.gitignore b/.gitignore
@@ -5,9 +5,22 @@ notebooks/**/*.parquet
 notebooks/**/*.pkl
 notebooks/**/*.db
 
+# Ignore npy and npz data files by default
+*.np[yz]
 
-# Ignore any notebook that starts with an underscore
+# Ignore common data types by default
+*.csv
+*.parquet
+*.xls
+*.xlsx
+*.txt
+
+# Ignore profiler output
+*.prof
+
+# Ignore any notebook that starts with an underscore or test
 notebooks/**/_*.ipynb
+notebooks/**/test*.ipynb
 
 # Ignore vscode settings
 .vscode/
@@ -198,3 +211,6 @@ cython_debug/
 dj_*_conf.json
 # directory excluded from source control e.g. trash, scratch work, etc.
 .untracked
+# pixi environments
+.pixi/*
+!.pixi/config.toml
diff --git a/misc/demo_redis_mocking.py b/misc/demo_redis_mocking.py
@@ -72,10 +72,10 @@ def demonstrate_redis_mocking():
 
     # Patch the Redis availability and exceptions
     with (
-        patch("orcabridge.hashing.string_cachers.REDIS_AVAILABLE", True),
-        patch("orcabridge.hashing.string_cachers.redis.RedisError", MockRedisError),
+        patch("orcapod.hashing.string_cachers.REDIS_AVAILABLE", True),
+        patch("orcapod.hashing.string_cachers.redis.RedisError", MockRedisError),
         patch(
-            "orcabridge.hashing.string_cachers.redis.ConnectionError",
+            "orcapod.hashing.string_cachers.redis.ConnectionError",
             MockConnectionError,
         ),
     ):

diff --git a/...books/01_orcapod_core_concepts copy.ipynb → ...rials/01_orcapod_core_concepts copy.ipynb b/...books/01_orcapod_core_concepts copy.ipynb → ...rials/01_orcapod_core_concepts copy.ipynb
diff --git a/notebooks/02_orcapod_basic_usage copy.ipynb → ...torials/02_orcapod_basic_usage copy.ipynb b/notebooks/02_orcapod_basic_usage copy.ipynb → ...torials/02_orcapod_basic_usage copy.ipynb
diff --git a/notebooks/02_orcapod_basic_usage.ipynb → ...ld_tutorials/02_orcapod_basic_usage.ipynb b/notebooks/02_orcapod_basic_usage.ipynb → ...ld_tutorials/02_orcapod_basic_usage.ipynb
diff --git a/notebooks/03_orcacapod_qol_features.ipynb → ...tutorials/03_orcacapod_qol_features.ipynb b/notebooks/03_orcacapod_qol_features.ipynb → ...tutorials/03_orcacapod_qol_features.ipynb
diff --git a/notebooks/04_orcapod_tracker.ipynb → ...ks/old_tutorials/04_orcapod_tracker.ipynb b/notebooks/04_orcapod_tracker.ipynb → ...ks/old_tutorials/04_orcapod_tracker.ipynb
diff --git a/notebooks/05_orcabridge_dj_integration.ipynb → ...orials/05_orcabridge_dj_integration.ipynb b/notebooks/05_orcabridge_dj_integration.ipynb → ...orials/05_orcabridge_dj_integration.ipynb