[Management] Module clean up: make_catalog_runner

[sfarrens]

Clean up make_catalog_runner according to guidelines in #404

[sfarrens]

@aguinot can you point me to some data and config set up to test this module?

[martinkilbinger]

Hi @sfarrens, you can try to run make_catalogue here on candide:
/home/mkilbing/astro/Runs/shapepipe/CFIS/one_tile_MCCD/old
The (previous) config file is in that directory, cfis/config_make_cat_mccd.ini.
And the previous output file is in output/run_sp_Mc_2021-02-22_11-54-10. It's a rather old run from February, I hope the current module still works on all the output files.