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  • Yale University

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@LevensteinLab

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HuihongLi/README.md

Hi, I'm Huihong Li 👋

M.S. student in Computational Biology and Biomedical Informatics at Yale University.

Research Interests

Computational neuroscience, NeuroAI

Publications

  • Li, Huihong, et al. "Genome-wide consensus transcriptional signatures identify synaptic pruning linking Alzheimer’s disease and epilepsy." Molecular Psychiatry 31.3 (2026): 1774-1784.
  • Li, Huihong, et al. "Reconstruction of 1,979 prokaryotic metagenome-assembled genomes from 37 global cave environments." Scientific Data 12.1 (2025): 1896.
  • Li, Huihong, and Robert A. McDougal. "Local homeostatic scaling supports stable rate propagation under noise and heterogeneity." bioRxiv (2025): 2025-11.
  • Li, Huihong, et al. "Temporal Dynamics Dominates Microbiome and Resistome Assembly Despite Tetracycline Pressure in a Germfree Lettuce Model." (2025).

Popular repositories Loading

  1. HuihongLi HuihongLi Public

  2. OverlapModule OverlapModule Public

    A web application for analyzing gene overlaps between different modules across datasets. This tool enables researchers to identify statistically significant overlaps between gene modules from their…

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  3. CaveMAGs CaveMAGs Public

    The first prokaryotic cave metagenomic catalog from 37 geographical diverse cave environments. We employed an optimized genome reconstruction pipeline to recover 3,837 medium-to-high quality cave m…

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