tiny-deseq.r: formatting fixes for pvalue/padj precision#232
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taimontgomery merged 3 commits intomasterfrom Oct 5, 2022
Merged
tiny-deseq.r: formatting fixes for pvalue/padj precision#232taimontgomery merged 3 commits intomasterfrom
taimontgomery merged 3 commits intomasterfrom
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…leaner/better way, but for now this works
…triggered normally. Also refactored so that columns are referenced by name rather than by range. This should make it much easier to adapt the script to future changes in multi-index and metadata columns
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Tested on ram1 data. |
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The pvalue and padj columns are now formatted according to the host's default preferences for significant figures and scientific notation threshold. Empty cells are also formatted with "NA".
tiny-deseq.r has also been refactored to refer to counts table columns by name rather than by range. In addition to making the code more readable, this will make future changes to metadata and multi-index columns much easier.
Closes #230