GFFValidator: adding support for gzipped reference genome files#251
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taimontgomery merged 3 commits intomasterfrom Nov 9, 2022
Merged
GFFValidator: adding support for gzipped reference genome files#251taimontgomery merged 3 commits intomasterfrom
taimontgomery merged 3 commits intomasterfrom
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… has been moved from tiny-collapse into tiny.rna.util so that both it and GFFValidator can use it
# Conflicts: # tiny/rna/counter/validation.py
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Tested successfully with ram1 and lib303 data with gz compressed genome files. |
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GFFValidator will now validate chromosomes using gzipped reference genome FASTAs (if appropriate), and will no longer produce a warning under these circumstances
Closes #250