Issue202 spectro x2 d crystal#267

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Didou09 merged 59 commits intodevelfrom

Issue202_SpectroX2DCrystal

Nov 20, 2019

Commits on Oct 2, 2019

[Issue203] Created tf.data._spectrafit2d.py and tf.geom._core_Optics.py
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tofu/data/_spectrafit2d.py added
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[Issue203] Advanced tofu/data/_spectrafit2d.py
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[Issue203] Advanced tofu/data/_spectrafit2d.py
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Commits on Oct 4, 2019

[Issue203] Advanced tofu/data/_spectrafit2d.py: included simultaneous multi ellipse fitting before re-sampled 2d fitting with known x0(y) and bsplines for y
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Commits on Oct 8, 2019

Merge branch 'devel' into Issue203_SpectroX2DSpectraFittingNC
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Commits on Oct 15, 2019

[Issue203] Advanced a bit herratically spectral fits...
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[Issue203] Started latex / pdf notes on ellipse intersection with plane for spectral fits (Notes_Upgrades)
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Commits on Oct 16, 2019

[Issue203] Moved notes to Notes_Upgrades/SpectroX2D
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[Issue203] Ellipses coordinates transform ok until direct problem (Notes) => try with crystal method
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[Issue202] Advanced CrystalBragg class up to public class methods, including local plot from geom to ellipses, to be continued
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[Issue202] Tested, about to merge with Issue203
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[Issue202] Advanced reverse coordinates transform in Notes
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Commits on Oct 17, 2019

Commits on Oct 18, 2019

Commits on Oct 21, 2019

[Issue202] Advanced plot for fit and fitting 2d spectra function, to be finished and tested
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Commits on Oct 22, 2019

[Issue202] plot of coords tranform and 2d spectral fit almost operational => need to test with lambda => need to test crystal instanciation
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[Issue202] Save crystal for further testing
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Commits on Oct 23, 2019

[Issue202] CyrstalBragg instanciation ok up to dgeom and dmat, ArXVII tested, surface computed, add rotation axis in dgeom and angle, add other crystals, try plotting fitted data
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Commits on Oct 24, 2019

[Issue202] Advanced plotting
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Commits on Oct 25, 2019

[Issue202] Advanced CrystalBragg.plot(), to be checked
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Commits on Oct 28, 2019

Commits on Oct 29, 2019

[Issue202] Advanced Notes on generalization with sketch, to be finished
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[Issue202] get_summary() operational for CrystalBragg
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[Issue202] CrystalBragg.plot() operational for proj='all', starting get_CamLOS1D_from_Crystal()
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[Issue202] get_CamLOS1D_from_Crystal() almost operational, to be finished
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Commits on Oct 30, 2019

[Issue202] CrystalBragg.plot(), move() and get_Rays_from_summit() operational and consistent
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[Issue202] CrystalBragg.get_Rays_envelopp() ok, but understand sagital focus, then spectral fit
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Commits on Oct 31, 2019

Commits on Nov 4, 2019

[merge] merge with devel (lost py2.7 support)
lasofivec
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Commits on Nov 5, 2019

Merge remote-tracking branch 'origin/devel' into Issue202_SpectroX2DCrystal
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[Issue202] Added sep=None keyword arg to CrystalBragg.__init__() for consistency with other classes and retor-compatibility
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[Issue202] Moving back _spectralfit2d.py to tofu/data and starting parameterizing with lamb0 optionally forced
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Merge branch 'Issue202_SpectroX2DCrystal' of https://github.com/ToFuProject/tofu into Issue202_SpectroX2DCrystal
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Merge remote-tracking branch 'origin/devel' into Issue202_SpectroX2DCrystal
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[Issue202] Advanced spectrum fit 1d
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Commits on Nov 6, 2019

[Issue202] Advancing on spectralfit2d
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Commits on Nov 7, 2019

[Issue202] Advanced 2d fitting => use curve_fit with Bsplines and provide jacobian using BSplines.basis_element()
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Commits on Nov 8, 2019

Commits on Nov 12, 2019

[Issue202] 2d fit operational but still slow and lacks accuracy => sigma and delta common to same-ion lines + re-sample on less points using 2d Bsplines + adjust geometry + write same functions for…
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Commits on Nov 13, 2019

[Issue202] Advanced new fitting routines for spectral 1d and 2d, based on dlines and grouped by ions for sigma/dlamb, to be continued
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Commits on Nov 14, 2019

[Issue202] Saving before switching to Jack Hare's issue #248
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[Issue202] Advanced get_x0_bounds() from dlines in tf.data._spectralfit2d.py
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Commits on Nov 20, 2019

Merge branch 'devel' into Issue202_SpectroX2DCrystal
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[Issue202] Just making sure tofu is stable to merge this non-finalized branch into devel for release 1.4.2
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[Issue202] PEP8 Compliance 1
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Merge branch 'devel' into Issue202_SpectroX2DCrystal
Didou09
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Merge branch 'devel' into Issue202_SpectroX2DCrystal
Didou09
authored