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1. PartridgeChhetri_etal PartridgeChhetri_etal Public

   Large scale transcription factor analysis in single human cell type

   Python 5 3

2. watershed_pipeline watershed_pipeline Public

   Nextflow based rare genetic variant prioritization pipeline

   Nextflow

3. Encode_wgbs_pipe Encode_wgbs_pipe Public

   WGBS DNA methylation pipeline for ENCODE consortium samples

   Shell 1

4. single-cell-RNAseq single-cell-RNAseq Public

   GATK based genotype/variant calling from single-cell RNAseq samples

   Shell

5. ENCODE-DCC/dna-me-pipeline ENCODE-DCC/dna-me-pipeline Public

   DCC/DAC methylation pipeline source

   Perl 56 26

6. Polygenic_risk_score Polygenic_risk_score Public

   Polygenic risk score prediction in complex traits across genetic ancestries

   Python