Genotype/Variant Calling

GATK based genotype/variant calling from single-cell RNAseq samples

Name		Name	Last commit message	Last commit date
Latest commit History 24 Commits
genotype_correlations-rnaedit		genotype_correlations-rnaedit
genotype_correlations		genotype_correlations
glimpse_imputation/GLIMPSE_map		glimpse_imputation/GLIMPSE_map
readcount_scripts		readcount_scripts
seqtksampling		seqtksampling
variant_calling		variant_calling
variant_calling_v1.0.1		variant_calling_v1.0.1
.gitignore		.gitignore
LICENSE		LICENSE
README.md		README.md
awk_fasta_edit.sh		awk_fasta_edit.sh
gatk_pipeline_v2.sh		gatk_pipeline_v2.sh
genotype_correlation_mainplus-rnaedit.sh		genotype_correlation_mainplus-rnaedit.sh
genotype_correlation_mainplus.sh		genotype_correlation_mainplus.sh
variant_call.sh		variant_call.sh
variant_calling_pipeline.sh		variant_calling_pipeline.sh

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