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update(notebooks, mfhob.py): clean paths in jupyter notebooks #1711

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Merged
jlarsen-usgs merged 13 commits into from
Feb 16, 2023
Merged

update(notebooks, mfhob.py): clean paths in jupyter notebooks #1711

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aa2bad8
update(notebooks, mfhob.py): clean paths in jupyter notebooks
jlarsen-usgs Feb 7, 2023
4482df1
run isort
jlarsen-usgs Feb 7, 2023
999c8fe
fix relative path printing
jlarsen-usgs Feb 8, 2023
ac3eb18
fix relative import
jlarsen-usgs Feb 8, 2023
9882ee1
run isort
jlarsen-usgs Feb 8, 2023
913f96a
fix docstring
jlarsen-usgs Feb 9, 2023
1040da4
update relpath call in notebooks
jlarsen-usgs Feb 9, 2023
b80f885
unversion mfsim.lst
jlarsen-usgs Feb 9, 2023
6c09ca6
unversion raster xml files
jlarsen-usgs Feb 9, 2023
58fe93d
update notebooks
jlarsen-usgs Feb 9, 2023
4384c8e
echo relative paths in check.py
jlarsen-usgs Feb 9, 2023
50b09ce
unversion xml files
jlarsen-usgs Feb 9, 2023
aeed97f
update flopy3_PlotArrayExample notebook
jlarsen-usgs Feb 9, 2023
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291 changes: 151 additions & 140 deletions examples/Notebooks/flopy3.3_PlotCrossSection.ipynb
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361 changes: 180 additions & 181 deletions examples/Notebooks/flopy3.3_PlotMapView.ipynb
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37 changes: 21 additions & 16 deletions examples/Notebooks/flopy3_LoadSWRBinaryData.ipynb
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343 changes: 154 additions & 189 deletions examples/Notebooks/flopy3_MT3D-USGS_example.ipynb
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118 changes: 56 additions & 62 deletions examples/Notebooks/flopy3_ModelCheckerExample.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -14,20 +14,19 @@
"execution_count": 1,
"metadata": {
"execution": {
"iopub.execute_input": "2022-12-15T13:04:48.905414Z",
"iopub.status.busy": "2022-12-15T13:04:48.905078Z",
"iopub.status.idle": "2022-12-15T13:04:50.152585Z",
"shell.execute_reply": "2022-12-15T13:04:50.149052Z"
"iopub.execute_input": "2023-02-08T16:04:18.601873Z",
"iopub.status.busy": "2023-02-08T16:04:18.601873Z",
"iopub.status.idle": "2023-02-08T16:04:19.643802Z",
"shell.execute_reply": "2023-02-08T16:04:19.643802Z"
}
},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"3.7.15 (default, Oct 18 2022, 09:36:49) \n",
"[GCC 11.2.0]\n",
"flopy version: 3.3.6\n"
"3.9.12 (main, Apr 4 2022, 05:22:27) [MSC v.1916 64 bit (AMD64)]\n",
"flopy version: 3.3.7\n"
]
}
],
Expand Down Expand Up @@ -60,10 +59,10 @@
"execution_count": 2,
"metadata": {
"execution": {
"iopub.execute_input": "2022-12-15T13:04:50.196941Z",
"iopub.status.busy": "2022-12-15T13:04:50.195949Z",
"iopub.status.idle": "2022-12-15T13:04:50.201631Z",
"shell.execute_reply": "2022-12-15T13:04:50.200785Z"
"iopub.execute_input": "2023-02-08T16:04:19.659976Z",
"iopub.status.busy": "2023-02-08T16:04:19.659976Z",
"iopub.status.idle": "2023-02-08T16:04:19.674366Z",
"shell.execute_reply": "2023-02-08T16:04:19.674366Z"
}
},
"outputs": [],
Expand All @@ -83,10 +82,10 @@
"execution_count": 3,
"metadata": {
"execution": {
"iopub.execute_input": "2022-12-15T13:04:50.206437Z",
"iopub.status.busy": "2022-12-15T13:04:50.204872Z",
"iopub.status.idle": "2022-12-15T13:04:50.267043Z",
"shell.execute_reply": "2022-12-15T13:04:50.265833Z"
"iopub.execute_input": "2023-02-08T16:04:19.677325Z",
"iopub.status.busy": "2023-02-08T16:04:19.677325Z",
"iopub.status.idle": "2023-02-08T16:04:19.888716Z",
"shell.execute_reply": "2023-02-08T16:04:19.888716Z"
}
},
"outputs": [],
Expand All @@ -112,10 +111,10 @@
"execution_count": 4,
"metadata": {
"execution": {
"iopub.execute_input": "2022-12-15T13:04:50.272187Z",
"iopub.status.busy": "2022-12-15T13:04:50.271848Z",
"iopub.status.idle": "2022-12-15T13:04:50.279728Z",
"shell.execute_reply": "2022-12-15T13:04:50.278537Z"
"iopub.execute_input": "2023-02-08T16:04:19.893903Z",
"iopub.status.busy": "2023-02-08T16:04:19.892871Z",
"iopub.status.idle": "2023-02-08T16:04:19.904170Z",
"shell.execute_reply": "2023-02-08T16:04:19.904170Z"
}
},
"outputs": [
Expand Down Expand Up @@ -174,10 +173,10 @@
"execution_count": 5,
"metadata": {
"execution": {
"iopub.execute_input": "2022-12-15T13:04:50.283409Z",
"iopub.status.busy": "2022-12-15T13:04:50.283145Z",
"iopub.status.idle": "2022-12-15T13:04:50.315526Z",
"shell.execute_reply": "2022-12-15T13:04:50.314585Z"
"iopub.execute_input": "2023-02-08T16:04:19.908142Z",
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"shell.execute_reply": "2023-02-08T16:04:19.934341Z"
}
},
"outputs": [
Expand Down Expand Up @@ -235,10 +234,10 @@
"execution_count": 6,
"metadata": {
"execution": {
"iopub.execute_input": "2022-12-15T13:04:50.320014Z",
"iopub.status.busy": "2022-12-15T13:04:50.319572Z",
"iopub.status.idle": "2022-12-15T13:04:50.332316Z",
"shell.execute_reply": "2022-12-15T13:04:50.331453Z"
"iopub.execute_input": "2023-02-08T16:04:19.937333Z",
"iopub.status.busy": "2023-02-08T16:04:19.937333Z",
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"shell.execute_reply": "2023-02-08T16:04:19.949813Z"
}
},
"outputs": [
Expand All @@ -248,7 +247,7 @@
"rec.array([('Warning', 'OC', 0, 0, 0, 0.0000000e+00, '\\r OC package: action(s) defined in OC stress_period_data ignored as they are not part the stress periods defined by DIS'),\n",
" ('Warning', 'RCH', 0, 0, 0, 1.1785914e-09, '\\r RCH package: Mean R/T ratio < checker warning threshold of 2e-08 for 1 stress periods'),\n",
" ('Warning', 'RCH', 0, 0, 0, 1.0000000e+00, '\\r RCH package: Variable NRCHOP set to value other than 3')],\n",
" dtype=[('type', 'O'), ('package', 'O'), ('k', '<i8'), ('i', '<i8'), ('j', '<i8'), ('value', '<f8'), ('desc', 'O')])"
" dtype=[('type', 'O'), ('package', 'O'), ('k', '<i4'), ('i', '<i4'), ('j', '<i4'), ('value', '<f8'), ('desc', 'O')])"
]
},
"execution_count": 6,
Expand Down Expand Up @@ -281,24 +280,18 @@
"execution_count": 7,
"metadata": {
"execution": {
"iopub.execute_input": "2022-12-15T13:04:50.336718Z",
"iopub.status.busy": "2022-12-15T13:04:50.336423Z",
"iopub.status.idle": "2022-12-15T13:04:50.374147Z",
"shell.execute_reply": "2022-12-15T13:04:50.372999Z"
"iopub.execute_input": "2023-02-08T16:04:19.952897Z",
"iopub.status.busy": "2023-02-08T16:04:19.952789Z",
"iopub.status.idle": "2023-02-08T16:04:19.981127Z",
"shell.execute_reply": "2023-02-08T16:04:19.981127Z"
}
},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Errors and/or Warnings encountered.\n"
]
},
{
"name": "stdout",
"output_type": "stream",
"text": [
"Errors and/or Warnings encountered.\n",
"Errors and/or Warnings encountered.\n",
"\n",
"test1ss MODEL DATA VALIDATION SUMMARY:\n",
Expand Down Expand Up @@ -340,7 +333,7 @@
{
"data": {
"text/plain": [
"<flopy.utils.check.check at 0x7fa58e7977d0>"
"<flopy.utils.check.check at 0x203f9b37df0>"
]
},
"execution_count": 7,
Expand All @@ -364,10 +357,10 @@
"execution_count": 8,
"metadata": {
"execution": {
"iopub.execute_input": "2022-12-15T13:04:50.378162Z",
"iopub.status.busy": "2022-12-15T13:04:50.377706Z",
"iopub.status.idle": "2022-12-15T13:04:50.388571Z",
"shell.execute_reply": "2022-12-15T13:04:50.387651Z"
"iopub.execute_input": "2023-02-08T16:04:19.984278Z",
"iopub.status.busy": "2023-02-08T16:04:19.984278Z",
"iopub.status.idle": "2023-02-08T16:04:19.996435Z",
"shell.execute_reply": "2023-02-08T16:04:19.996435Z"
}
},
"outputs": [
Expand All @@ -388,7 +381,7 @@
{
"data": {
"text/plain": [
"<flopy.utils.check.check at 0x7fa5899df050>"
"<flopy.utils.check.check at 0x203f9b37970>"
]
},
"execution_count": 8,
Expand All @@ -412,11 +405,12 @@
"execution_count": 9,
"metadata": {
"execution": {
"iopub.execute_input": "2022-12-15T13:04:50.393098Z",
"iopub.status.busy": "2022-12-15T13:04:50.392696Z",
"iopub.status.idle": "2022-12-15T13:04:50.426082Z",
"shell.execute_reply": "2022-12-15T13:04:50.425048Z"
}
"iopub.execute_input": "2023-02-08T16:04:19.999494Z",
"iopub.status.busy": "2023-02-08T16:04:19.999494Z",
"iopub.status.idle": "2023-02-08T16:04:20.028618Z",
"shell.execute_reply": "2023-02-08T16:04:20.027814Z"
},
"scrolled": true
},
"outputs": [
{
Expand All @@ -432,7 +426,7 @@
" RCH package: Mean R/T ratio < checker warning threshold of 2e-08 for 1 stress periods\n",
" 1 instance of \r",
" RCH package: Variable NRCHOP set to value other than 3\n",
" see /tmp/tmp48abtm22/checksummary.csv for details.\n",
" see ..\\..\\..\\..\\AppData\\Local\\Temp\\10\\tmpcg8vtw8n\\checksummary.csv for details.\n",
"\n",
" Checks that passed:\n",
" Unit number conflicts\n",
Expand All @@ -459,7 +453,7 @@
{
"data": {
"text/plain": [
"<flopy.utils.check.check at 0x7fa5899df990>"
"<flopy.utils.check.check at 0x203fe67b4c0>"
]
},
"execution_count": 9,
Expand All @@ -476,10 +470,10 @@
"execution_count": 10,
"metadata": {
"execution": {
"iopub.execute_input": "2022-12-15T13:04:50.430108Z",
"iopub.status.busy": "2022-12-15T13:04:50.429576Z",
"iopub.status.idle": "2022-12-15T13:04:50.453607Z",
"shell.execute_reply": "2022-12-15T13:04:50.452630Z"
"iopub.execute_input": "2023-02-08T16:04:20.030805Z",
"iopub.status.busy": "2023-02-08T16:04:20.030805Z",
"iopub.status.idle": "2023-02-08T16:04:20.060127Z",
"shell.execute_reply": "2023-02-08T16:04:20.059402Z"
}
},
"outputs": [
Expand Down Expand Up @@ -592,10 +586,10 @@
"execution_count": 11,
"metadata": {
"execution": {
"iopub.execute_input": "2022-12-15T13:04:50.458107Z",
"iopub.status.busy": "2022-12-15T13:04:50.457502Z",
"iopub.status.idle": "2022-12-15T13:04:50.469968Z",
"shell.execute_reply": "2022-12-15T13:04:50.468952Z"
"iopub.execute_input": "2023-02-08T16:04:20.062323Z",
"iopub.status.busy": "2023-02-08T16:04:20.062323Z",
"iopub.status.idle": "2023-02-08T16:04:20.074603Z",
"shell.execute_reply": "2023-02-08T16:04:20.074603Z"
},
"pycharm": {
"name": "#%%\n"
Expand All @@ -610,7 +604,7 @@
"metadata": {
"anaconda-cloud": {},
"kernelspec": {
"display_name": "Python 3",
"display_name": "Python 3 (ipykernel)",
"language": "python",
"name": "python3"
},
Expand All @@ -624,7 +618,7 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.7.15"
"version": "3.9.12"
}
},
"nbformat": 4,
Expand Down
83 changes: 47 additions & 36 deletions examples/Notebooks/flopy3_Modflow_postprocessing_example.ipynb
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