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Cli metadata more#4251

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joshmoore merged 26 commits intoome:metadatafrom
joshmoore:cli-metadata-more
Dec 17, 2015
Merged

Cli metadata more#4251
joshmoore merged 26 commits intoome:metadatafrom
joshmoore:cli-metadata-more

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Continues on from gh-4240

manics and others added 26 commits October 2, 2015 16:28
--ns for filtering by namespace
--nsre for filtering by a namespace regular expression
Sooner or later you just know someone's going to put 1000+ annotations on a single object. Since the underlying BlitzGateway listAnnotations() method already returns a generator we might as well continue to use it instead of loading all annotations into memory at once.
If the bulk-annotations CSV file is for a screen and contains a plate (name) column but we are annotating a plate, then only process rows in the CSV with a matching plate (name).
Output row numbers, don't dump entire column (otherwise number of lines of output is proportional to |rows|^2)
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Merging for 0.0.3 and one further warning for @ximenesuk and @emilroz

joshmoore added a commit that referenced this pull request Dec 17, 2015
@joshmoore joshmoore merged commit fee6548 into ome:metadata Dec 17, 2015
@joshmoore joshmoore deleted the cli-metadata-more branch December 17, 2015 15:46
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