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Release 0.4.1#93

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ressy merged 47 commits intomasterfrom
release-0.4.1
Jan 10, 2023
Merged

Release 0.4.1#93
ressy merged 47 commits intomasterfrom
release-0.4.1

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@ressy ressy commented Dec 15, 2022

  • Overhauled unit tests with more modular saved inputs and expected outputs (#92)
  • Made warnings encountered in the chiimp script display as they occur, rather than at the end (#91)
  • Made load_dataset warn about repeated Sample+Replicate+Locus entries across rows (#90)
  • Made load_config warn about any unrecognized configuration file entries (#88)

ressy added 30 commits May 10, 2022 14:35
Only apply labeling for untested sample/locus cases to appropriate columns
Fix row ordering in genotype summary tables
Handle one, zero, or unrecognized extra columns in tabulate_allele_names
Sync with release 0.4.0
Check config files for unrecognized keys
stringsAsFactors strikes again
Check dataset spreadsheets for duplicate sample/replicate/locus combinations
Make warnings display as they occur when running chiimp script
migrating from one big glob of test data to more modular per-test input
and output data as RDS files
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ressy commented Jan 7, 2023

Tested with combinations of:

  • Windows 11 / Mac OS 10.15 / Ubuntu 20.04.4 LTS / Debian Sid
  • R 3.6.3 / 4.2.2
  • Pandoc 2.5 / 2.17.1.1 / 2.19.2

@ressy ressy merged commit 646f52e into master Jan 10, 2023
@ressy ressy deleted the release-0.4.1 branch January 10, 2023 17:14
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